SubtiBank SubtiBank
ypmT [2017-8-11 16:0:3]
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ypmT [2017-8-11 16:0:3]

unknown
locus
BSU21720
pI
8.81
mw
7.59 kDa
protein length
64 aa Sequence Blast
gene length
192 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,290,078 → 2,290,272

    The protein

    Protein family

  • type-I 3-dehydroquinase family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]-[gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    (according to [http://dbtbs.hgc.jp/COG/prom/ypmT.html DBTBS]) null

    additional information

  • the terminator is [protein|search|NusA]-dependent [ http://www.nature.com/articles/nmicrobiol20157 Reference]
    • view in new tab

    genes
    [gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B272 (ypmT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1271 NBRP B. subtilis, Japan]